Browse of TCMCG057C54966 protein

CDS

Accession Number	TCMCG057C54966
gbkey	CDS
Protein Id	XP_018460958.1
Location	complement(join(22361..22402,22493..22579,22679..22753,22869..22985,23094..23177,23312..23377,23524..23589,23679..23750,23841..23942,24052..24226,24295..24350,24552..24659,24748..24816,24891..24999,25122..25210,27285..27362,27678..27800,27996..28115,28220..28300,28390..28536,28625..28703,29248..29322,29481..29590,29684..29782,30043..30158,30244..30352,30422..30640,30737..31002,31083..31240,31324..31456,31610..31673,31818..31847))
Gene	LOC108831964
GeneID	108831964
Organism	Raphanus sativus

Protein

Length	1107aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018605456.1
Definition	PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Belongs to the peptidase C19 family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko01002        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K11838        [VIEW IN KEGG]
EC	3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04068        [VIEW IN KEGG] ko05168        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] ko05203        [VIEW IN KEGG] map04068        [VIEW IN KEGG] map05168        [VIEW IN KEGG] map05169        [VIEW IN KEGG] map05203        [VIEW IN KEGG]
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004843        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006508        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007154        [VIEW IN EMBL-EBI] GO:0007165        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008233        [VIEW IN EMBL-EBI] GO:0008234        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009753        [VIEW IN EMBL-EBI] GO:0009755        [VIEW IN EMBL-EBI] GO:0009867        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019783        [VIEW IN EMBL-EBI] GO:0023052        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0032870        [VIEW IN EMBL-EBI] GO:0036459        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070011        [VIEW IN EMBL-EBI] GO:0070887        [VIEW IN EMBL-EBI] GO:0071229        [VIEW IN EMBL-EBI] GO:0071310        [VIEW IN EMBL-EBI] GO:0071395        [VIEW IN EMBL-EBI] GO:0071495        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0101005        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI] GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGACTCTGATGACTACGCCGCCGCTAGATCAAAAGGACGAGGAGATGCTCGTTCCGCATTCTGACTTGGTCGAAGGACCTCAGCCCATGGAAGTTGCTCAGCCTGAGGAGAATCCGCCAGCCGAGGAGATTCCCACTCTGAAATTCACGTGGTACACCCAAGGTTTCACCAGGCTCAACGTTAGGAGGCTTTACTCTGATGTATTTGTTGTTGGAGGTTATAAATGGAGATTATTGATTTTTCCAAAAGGAAACAATGTCGACCATTTGTCCATGTACTTGGATGTTGCTGACGCTGCGAGTTTGCCTTACGGGTGGAGCAGATATTCACACTTCAGCCTGGCTGTAGTGAATCAAATGAACAGCAAAAATTCCATCAGAAAAGAGACCCAACATCAATTCAATGCAAGAGAAAGCGATTGGGGGTTTACATCATTCATGAATCTCAGCGAGCTCTATGATCCCACTCGTGGATATTTAGTGAATGATACTCTTCTGATCCAAGCTGAAGTTGATGTGCCGAAGGTTATAGATTACTTGTCATATGACTCAAAGAAAGAGACTGGTTTTGTTGGACTTAAGAACCAAGGTGCTACCTGTTACATGAATTCTCTCCTACAGACATTATACCACATTCCTTACTTCAGAAAGGCTGTTTACCACATGCCAACAACTGAGATTGATGCACCTACGGCTAGTATCCCATTGGCGCTCCAGGGTTTGTTTTACAAGCTTCAATATAATGACACCCGTGTAGGGACAAAGGAGCTGACAAAGTCTTTTGGTTGGGATACGAATGATTCGTTCATGCAACATGATGTTCAAGAACTCAACCGAGTTCTTTCTGAAAAGCTTGAGGACAAAATGAAGGGGACTGTTGTGGAGGGAACAATACAGAAGCTATTTGAAGGTCACCAGATGAATTACATTGCGTGCATTAATGTCGATTACAAATCTACAAGGAAAGAATCATTCTATGACCTCCAGCTTGTTGTGAAAGGCTGCAAAGATGTATATGCTTCTTTTGACAAGTATGTTGAAGTTGAACGCCTTGAAGGAGACAACAAATACCAGGCAGAAGGACATGGTTTGCAGGATGCGAAAAAAGGTGTTCTGTTCACTGACTTTGCACCCGTACTTCAACTTCAGCTCAAGAGGTTTGAATATGATTTTATGCGAGACACAATGGTGAAGATAAACGATCGATATGAGTTTCCTCTTCACCTGGATCTCGACAGAGAGAATAGAAAATACCTATCCCCTGATGCTGACAAGAGTGTTCGTAATCTCTACACACTCCATAGTGTCTTAGTCCACAGTGGAGGAGTGCATGGAGGGCACTATTATGCTTTTATTAGGCCAACACTCTCAGATCAATGGTATAAGTTTGATGATGAACGGGTGACGAAGGAAGAAGTGAACAGGGCACTAGAAGAGCAATATGGGGGTGAAGAAGAGTTGCCGCAAAATAATCCTGGTGTCAATAATCCACCTTCTAAATTCACAAAATATTCCAACGCATACATGCTTGTTTATATCCGGGAAAGCGACAAGGATAAAATAATATGCAACGTTGATAAAAAAGATGTTGCAGAACATTTACGGGTGAGGCTGAAAAAAGAGCAAGAAGAAAAGGAAGATAAAAGAAAATATAAGGCTCAAGCTCACCTTTTCACTACAATCAAGGTCGCAAGAGATGAAGACATCACTGAGCAAATTGGAAAGAGTATGTATCTTGATCTTGTTGATCATGAAAAAGTTCAGAGTTTTCGAATCCAGAAACAGACTCCCTTCCAACAATTTAAGGAAGAGATGGCCAAAGAATTTGGTGTTCCGGTTCAGCTTCAGCGGTACTGGATTTGGGCAGAGAGGCAAAACCATACTTATCGTCCCAACCGTCCCCTATTACCTCATGAAGAACTACAGACGGTTGGACAGATAAGCGAGGCATCTAACAAGGCAAACAATGCTGAACTAATGCTGTTTTTGGAAATAGAGCGTGGATTGGATGCGCGTCCGGTTCCTCCCCCAGACAAGTCACCTGAAGACATTCTCCTTTTCTTTAAGCTCTATGACCCTGAGAATGAATTACTAAGATATGTTGGCAGGCTCATGGTGAAAAGTTCCAGTAAGCCCATGGATATAGTAGGGAAACTGAATCAAATGGCTGGCTTTTCTCCTGATGAGGAAATAGAACTTTTTGAGGAAATACAGTTTGAACCTAGTGTAATGTGCGAGCATCTAGATAAGAAGACTTCTTTCAGACTATCCCAAATTGTAAATGGAGATATCATTTGCTATCAAAAACCTATTTCCATCCAGGAGAATGAATGTCCATACCCGGATGTGCCATCGTTTTTGGAGTACGTACATAATCTACAGGTGGTGCGTTTTCGTAGACTGGAAAAACCAAAAGAAGATGAATTTACTATGGAGTTGTCAAAGCTGCATTCTTATGATGATGTTGTGGAAAGATTGGCTGAGAAACTTGGCATTTATGATTCATCTAAAATTAGGCTTACTTCTCACAATTGCTACTCCCAGCAACCCATGCCTCAGCCTACCAAATACCGTGAAGTAGATCTTTCAGATATGTTAGCTCACCATAATCAGGCGTCTGACATTTTGTATTATGAAGTTCTGGACATTCCTCTTCCAGAACTGCAACGTCTTAAGACTCTAAAAGTAGCTTTCCATCATACCACAAAGGACGAAGTGGTAATCCACAATATCAGACTGCATAAGAAGAGTACTATCGGAGATGTTATTAATGAACTTAAAACAAAGGTGGAGCTTTCACATCAGGATGCAGAACTGAGGTTGCTTGAGGTGTTTTTCCACAAGATCTACAAGATCTTTCCATCTACCGAAAGAATTGAGAATATCAATGATCAGTACTGGACTTTACGAGCAGAGGAGATACCTGAGGAAGAGAAGAACATTGGCCCCAATGATCGATTAATTCACGTGTACCATTTTACTAAAGAGACCGCACAAAATCAGCAAGTACAAAATTTCGGAGATCCCTTCTTTTTGGTAATACACGAAGGTGAAACTTTACAAGAAATCAAGACCCGTATCCAAAAGAAACTCCGTGTCCCTGATGAGGACTTTGCCAAGTGGAAGTTTGCTTCATTTTCGTTGGGACGTCCGGACTACTTGCAGGACACAGATGTAGTTTATAATCGCTTTCAGAGAAAGGATGTATATGGTGCATGGGAGCAGTATCTTGGGTTGGAGCACGTTGATAATTCTCCTAAAAGGGCTTATGCTGCAAATCAGAATCGGCATGCATATGAGAAGCCGATGAAAATATACAATTAG

Protein:   MTLMTTPPLDQKDEEMLVPHSDLVEGPQPMEVAQPEENPPAEEIPTLKFTWYTQGFTRLNVRRLYSDVFVVGGYKWRLLIFPKGNNVDHLSMYLDVADAASLPYGWSRYSHFSLAVVNQMNSKNSIRKETQHQFNARESDWGFTSFMNLSELYDPTRGYLVNDTLLIQAEVDVPKVIDYLSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEIDAPTASIPLALQGLFYKLQYNDTRVGTKELTKSFGWDTNDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQKLFEGHQMNYIACINVDYKSTRKESFYDLQLVVKGCKDVYASFDKYVEVERLEGDNKYQAEGHGLQDAKKGVLFTDFAPVLQLQLKRFEYDFMRDTMVKINDRYEFPLHLDLDRENRKYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEEVNRALEEQYGGEEELPQNNPGVNNPPSKFTKYSNAYMLVYIRESDKDKIICNVDKKDVAEHLRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDEDITEQIGKSMYLDLVDHEKVQSFRIQKQTPFQQFKEEMAKEFGVPVQLQRYWIWAERQNHTYRPNRPLLPHEELQTVGQISEASNKANNAELMLFLEIERGLDARPVPPPDKSPEDILLFFKLYDPENELLRYVGRLMVKSSSKPMDIVGKLNQMAGFSPDEEIELFEEIQFEPSVMCEHLDKKTSFRLSQIVNGDIICYQKPISIQENECPYPDVPSFLEYVHNLQVVRFRRLEKPKEDEFTMELSKLHSYDDVVERLAEKLGIYDSSKIRLTSHNCYSQQPMPQPTKYREVDLSDMLAHHNQASDILYYEVLDIPLPELQRLKTLKVAFHHTTKDEVVIHNIRLHKKSTIGDVINELKTKVELSHQDAELRLLEVFFHKIYKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKETAQNQQVQNFGDPFFLVIHEGETLQEIKTRIQKKLRVPDEDFAKWKFASFSLGRPDYLQDTDVVYNRFQRKDVYGAWEQYLGLEHVDNSPKRAYAANQNRHAYEKPMKIYN